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Start here

  • OpenHCS for imaging scientists

Tutorials

  • Your first plate workflow

How-to guides

  • Install and start OpenHCS
  • User guide

Explanation

  • Core Concepts
  • Integration boundaries
  • Architecture and ownership

Reference

  • Public API orientation
  • Reference
  • Appendices

Contributing and extending

  • Developer guide
  • Installation
OpenHCS
  • Index

Index

A | C | E | F | G | M | N | O | P | R | S | V | W | Z

A

  • Artifact
  • Artifact contract

C

  • Callable contract
  • Channel
  • Compilation session
  • Compiled execution bundle
  • Compiled step plan

E

  • Execution axis

F

  • Function pattern

G

  • Group by

M

  • Main flow
  • Materialization
  • Measurement
  • Microscope handler
  • Module artifact contract

N

  • Nominal registry

O

  • ObjectState

P

  • PipelineConfig
  • Processing contract

R

  • Runtime adapter
  • Runtime value

S

  • Site
  • Source binding
  • Source universe
  • Source workspace projection

V

  • Variable components
  • Virtual workspace

W

  • Well

Z

  • Z-stack

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