OpenHCS for Biologists
============================

User Guides
----------

This page is for non-technical users of OpenHCS, who want to get started with using the software without needing to write any code.

To get started, check out the following resources:

1. **Introduction**: :doc:`intro` - An overview of what OpenHCS is, when to use it, and its main features.

2. **Installation**: :doc:`installation_and_setup` - Step-by-step instructions to install OpenHCS on your computer.

3. **Interface Layout**: :doc:`basic_interface` - A simple tutorial to help you get familiar with the OpenHCS interface and features.

4. **Introductory workflow**: :doc:`intro_stitching` - Learn how to stitch images together using OpenHCS.

5. **Configuration reference**: :doc:`configuration_reference` - A reference of the configuration options available in OpenHCS.

6. **Glossary**: :doc:`glossary` - Definitions of common terms used in OpenHCS and image analysis.

7. **Troubleshooting and FAQ**: :doc:`troubleshooting_FAQ` - Common issues and solutions to help you troubleshoot problems.


.. toctree::
   :hidden:
   :maxdepth: 20

   intro
   installation_and_setup
   basic_interface
   intro_stitching
   configuration_reference
   glossary
   troubleshooting_FAQ